@PeterJones, I tried your suggestion and I also did it again without the symbols showing for EOL. Everything seems to be okay. I have an auto-update set for Notepad++ through Ninite but I noticed the version hasn’t changed. What did change, however, was an update to FileZilla.
@whitegryphon, try checking out the issue now after updating FileZilla, if that is what you are using. Mine appears to have been fixed with the latest version…